AT3G50720.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase, ATN1-like (InterPro:IPR015784), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G50730.1); Has 123084 Blast hits to 121815 proteins in 4788 species: Archae - 145; Bacteria - 13767; Metazoa - 46997; Fungi - 11154; Plants - 32049; Viruses - 444; Other Eukaryotes - 18528 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18847519..18849430 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43106.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.74 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAISPTMMLN ANYPFFMSAF GSDDNNDESD NQFDFNISRE LLLNPKDIMR GEMIGEGGNS IVYKGRLKNI VPVAVKIVQP GKTSAVSIQD KQQFQKEVLV 101: LSSMKHENIV RFVGACIEPQ LMIVTELVRG GTLQRFMLNS RPSPLDLKVS LSFALDISRA MEYLHSKGII HRDLNPRNVL VTGDMKHVKL ADFGLAREKT 201: LGGMTCEAGT YRWMAPEVCS REPLRIGEKK HYDQKIDVYS FALIFWSLLT NKTPFSEIPS ISIPYFVNQG KRPSLSNIPD EVVPILECCW AADSKTRLEF 301: KDITISLESL LKRFCSERSN NEITITEDEA YDDEIEELET TWLLPKRYIK LKKPKKIKQN VMKKILPFFK KFISSKW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)