AT3G49060.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.756 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : U-box domain-containing protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT2G45910.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18187054..18191878 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90260.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 795 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEIGGEELV LDVDETIFVA VAEDVERSKT TVLWAARNFS GKKICLLYVH RTARAASWTH KKLVGGSFKK HDVKVIERVE KPKVDELMNS YLQLLSETEI 101: QTDKLCIAGQ NIEECIVELI ARHKIKWLVM GAASDKHYSW KMTDLKSKKA IFVCKKAPDS CHIWFLCKGY LIFTRASNDD SNNRQTMPPL VQLDSDNETR 201: KSEKLESSYM RRRLRYWRSL LEQVNLLQNC ADGEKDTGQL EREKVEPRAP PLFSSGSSSS FGEPVGPEPV SPELVDSDTL NTSNVEEKER EGDVARKVHR 301: YDKAMHDIGQ SDRTVYGEAG KKWEEDASTT EALCKAKALE GLCIKESSQR KRLEELLEKE KLEVKMVIEQ NNGFMKELQM VQGRNLKLES QMRKLQDLEK 401: EHGEKFDTAM ELLKSFRQKR DEIRIDHENA VKEVNALRRL VKGETGESSG SEMLDYSFME INEATNEFDP SWKLGEGKYG SVYKGNLQHL QVAVEILSRV 501: RHPNLVTLMG ACPESRSLIY QYIPNGSLED CFSSENNVPA LSWESRIRIA SEICSALLFL HSNIPCIIHG NLKPSKILLD SNLVTKINDY GISQLIPIDG 601: LDKSDPHVDP HYFVSREMTL ESDIYAFGII LLQLLTRRPV SGILRDVKCA LENDNISAVL DNSAGDWPVA RGKKLANVAI RCCKKNPMNR PDLAVVLRFI 701: DRMKAPEVPS SETSSYANQN VPRRPPSHYL CPIFQEVMKD PLIAADGFTY EAEAIREWLA NGHDTSPMTN LKMEDCNLIP NHALHLAIQD WQNQW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)