AT3G46400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46370.1); Has 159035 Blast hits to 123588 proteins in 4620 species: Archae - 115; Bacteria - 13661; Metazoa - 44953; Fungi - 10132; Plants - 70985; Viruses - 384; Other Eukaryotes - 18805 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17073196..17077328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99274.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.66 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 883 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESSHRFLLV ALTVASSIIH LVQAQAGFIS LDCGLSPNEQ SPYVELETGL QFLSDSSFIQ SGKIGRIDAS LESKYPRSQT TLRYFPDGIR NCYNVNVYKG 101: TNYLIRATIN YGNYDGLNIS PRFDLYIGPN FWVTIDLEKH VGGDTWEEII HIPKSNSLDV CLIKTGTSTP IISVLELRSL PNNTYITESG SLKSILRSYL 201: SVSTKVIRYP DDFYDRKWVP YFESEWRQIS TILKVNNTIN GFLAPQEVLM TAAVPSNASV PLSFTKDLEF PKDKLYFYFH FSEIQPLQAN QSREFSILWN 301: GEIIIPTLSP KYLKASTLYS VSPFVCEVGK CLLELKRTQN STLPPLLTAI EVFTVIDFPQ SKTNEDDVSA IKNIKDTHGL SRVSWQGDPC VPRQFLWEGL 401: SCNDKNVSAS PRITSLNLSS SGLVGTIPSG IQNFTLLEKL DLSNNNLTGL VPEFLAKMET LLFIDLRKNK LNGSIPNTLR DREKKGLQIF VDGDNTCLSC 501: VPKNKFPMMI AALAASAIVV AILVLILIFV FTKKKWSTHM EVILPTMDIM SKTISEQLIK TKRRRFAYSE VVEMTKKFEK ALGEGGFGIV YHGYLKNVEQ 601: VAVKVLSQSS SQGYKHFKAE VELLLRVHHI NLVSLVGYCD EKDHLALIYE YMPNGDLKDH LSGKQGDSVL EWTTRLQIAV DVALGLEYLH YGCRPSMVHR 701: DVKSTNILLD DQFMAKIADF GLSRSFKVGD ESEISTVVAG TPGYLDPEYY RTSRLAEMSD VYSFGIVLLE IITNQRVFDQ ARGKIHITEW VAFMLNRGDI 801: TRIVDPNLHG EYNSRSVWRA VELAMSCANP SSEYRPNMSQ VVIELKECLT TENSMKVKKN DTDAGSSLEL SLSFDTEVVP TAR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)