AT3G46350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.843 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G46340.1); Has 140523 Blast hits to 117178 proteins in 4559 species: Archae - 93; Bacteria - 12764; Metazoa - 42898; Fungi - 9557; Plants - 57776; Viruses - 354; Other Eukaryotes - 17081 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17036427..17041680 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 97877.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.39 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 871 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNSSHELLLT ALIATFAIFH LVQAQEQEGF ISLDCGLAPT EPSPYTEPVT TLQYSSDSNF IQSGKLGRID TSLQTFFLKQ QTTLRYFPDG IRNCYNLTVK 101: QGTNYLIRAR FTYGNYDGRN MSPTFDLYLG PNLWKRIDMT KLQNKVSTLE EITYIPLSNS LDVCLVKTNT TIPFISALEL RPLPSNSYIT TAGSLRTFVR 201: FCFSNSVEDI RFPMDVHDRM WESYFDDDWT QISTSLTVNT SDSFRLPQAA LITAATPAKD GPSYIGITFS TSSEERFFIY LHFSEVQALR ANETREFNIS 301: INGESVADLY RPLSRTQSST HPPMINAIEI FLVSELLQSE TYENDVIAIK KIKDTYGLQL ISWQGDPCVP RLYKWDGLDC TDTDTYIAPR ITSLKLSSKG 401: LTGTIAADIQ YLTSLEKLDL SDNKLVGVVP EFLANMKSLM FINLTKNDLH GSIPQALRDR EKKGLKILFD GDKNDPCLST SCNPKKKFSV MIVAIVASTV 501: VFVLVVSLAL FFGLRKKKTS SHVKAIPPSP TTPLENVMST SISETSIEMK RKKFSYSEVM KMTNNFQRAL GEGGFGTVYH GDLDSSQQVA VKLLSQSSTQ 601: GYKEFKAEVD LLLRVHHINL LNLVGYCDER DHLALIYEYM SNGDLKHHLS GEHGGSVLSW NIRLRIAVDA ALGLEYLHIG CRPSMVHRDV KSTNILLDEN 701: FMAKIADFGL SRSFILGGES HVSTVVAGSL GYLDPEYYRT SRLAEMSDVY SFGIVLLEII TNQRVIDKTR EKPHITEWTA FMLNRGDITR IMDPNLNGDY 801: NSHSVWRALE LAMSCANPSS ENRPSMSQVV AELKECLISE NSLRSKNQDM SSQRSLDMSM NFDTKDVPSA R |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)