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AT3G45910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.947
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL162459EMBL:CP002686EnsemblPlants:AT3G45910EnsemblPlants:AT3G45910.1
entrez:823734GeneID:823734Gramene:AT3G45910.1HOGENOM:HOG000153199
KEGG:ath:AT3G45910OMA:LCCSHRRPIR:T47531Proteomes:UP000006548
RefSeq:NP_190177.1TAIR:AT3G45910UniGene:At.65252UniProt:Q9LZT9
Coordinates (TAIR10) chr3:-:16876338..16877075
Molecular Weight (calculated) 22617.50 Da
IEP (calculated) 8.88
GRAVY (calculated) -0.08
Length 200 amino acids
Sequence (TAIR10)
(BLAST)
001: MVQNLSREQY GFVIWVVGNN SIPEEIRSLT TFLSWENLGT CLLLDPNAHV GSLCCSHRRV LLVEEFLGSY LSWGILDFDL FVQSNALNGG VIDMLRRFGV
101: EVHISQPPTK TKKRSNANRK GFPDIELGKA MHSRALERNP SPMLLISSDS RLHTDVSHIT SLAFEIILFH TKKAPKDLKD LATKRVLWFD GVSKLTEVRI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)