AT3G45790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.989 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G46140.1); Has 119660 Blast hits to 118657 proteins in 4236 species: Archae - 156; Bacteria - 13379; Metazoa - 44420; Fungi - 11857; Plants - 30331; Viruses - 624; Other Eukaryotes - 18893 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16825005..16826222 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42415.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.80 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 376 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMIETEISL SGYHKRYGHL KFIELSDPPL TKRPRYSPSV IPPLPDQNPI FTLKLSPILL KNNKRKRFTP KSSSSLSVEE ITKQVFDGVV RKSSSWIKSE 101: FLGRGSYGSV YLATSKKAKT KTTMAIKSAE ISRASSLMDE ERILTRLSSP FIVRCYGHEI AREETLFGGE RTNYNLILEY CSGKSLFDLV NSNLGGLSEK 201: DVKLLARDIL YGLDYIHRAN IIHCDIKPEN ILLAPVENRI RPNGYVAKIG DFGLALEKGS SEYEKASGHR RGTTRYMSPE LIRHGIVDYA VDTWAFGCTV 301: LEMLTGQQVW GEHSDLGSVD WDILIGQSCY IPYIPDWLSE EAQHFLSRCL KRDPASSCKM KYPTLYLVCV SGSFGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)