AT3G45760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.719 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotidyltransferase family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45750.1); Has 1383 Blast hits to 1289 proteins in 203 species: Archae - 0; Bacteria - 1; Metazoa - 707; Fungi - 279; Plants - 174; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16801996..16804759 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53416.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.65 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||
| Length | 474 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDFRKNQAGE KNVSSKGIQK KVKNTMSIAS KRYNIDSYIL LDLDKVLDDA YSSFRPVSAD YNTRKELVKN LNAMAIDIFG KSEESSPVLE AYGSFAMNTF 101: SSQKDLDVSI NFSSGTSEFY REKKLEILTR FATKLRSLEG QGFVRNVVPI LSARVPIVRF CDQGTGIECD LTVESKDGIL TSQIIRIISQ IDDRFQKLCL 201: LIKHWARAHG VNNASHNTLN SISITMLVAH HLQTQSPPIL PPFSTLFKDG IDPPIVEKRT QKFLNWGQRN QESLGRLFAT FFIKVEDFTD VARNFARVFS 301: DYGAEKIYSS INRTVDDILE FLNGKVAGEH LTQKLFSQQT VVEPIPPVSP QQPHKKRVCL EKGYRAVGGI SHGREETHET SRGKRKRSGG NWGCRFSGGE 401: EPMPVGLWNE YSRSLDMPTP PPHYDKLLYK KVPLKTVELM CGHCSGANRH HPHIGLTSQK PEPPLMTRGL HSQV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)