AT3G44840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: farnesoic acid carboxyl-O-methyltransferase (TAIR:AT3G44860.1); Has 872 Blast hits to 866 proteins in 112 species: Archae - 0; Bacteria - 44; Metazoa - 9; Fungi - 5; Plants - 711; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16372499..16373759 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38932.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.25 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||
| Length | 348 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTSFTMIGG EGPESYRQHS KYQGGLLEAA TEKINEAIST KLNIDLASNL VNIADFGCST GPNTFRAVQT IIDAVEHKYQ QENNLEEIEF QVFFNDSSNN 101: DFNTLFKTLP PARKYFATGV PASFFGRVLP RSSLHVGVSS YSLHFLSKIP KKIKDCDSHA WNKDIHCTGF SKEVVRAYLD QYKIDMESFL TARAQELVSG 201: GLLFLLGSCL PNGVQMSETL NGMMIDCIGS SLNDIAKQGL IDQEKLDTFK LPIYVAYAGE IKQIIEDNVY YTIERFDIIS QENEEIPLDP EFLTVSFKVT 301: VGGIVASHFG QHVMEKTFEV VKTKTQEMLP QLANAKPGMQ YLIVLKRI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)