AT3G44830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.586 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Lecithin:cholesterol acyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Lecithin:cholesterol acyltransferase family protein; FUNCTIONS IN: phosphatidylcholine-sterol O-acyltransferase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lecithin:cholesterol acyltransferase (InterPro:IPR003386); BEST Arabidopsis thaliana protein match is: phospholipid:diacylglycerol acyltransferase (TAIR:AT5G13640.1); Has 743 Blast hits to 672 proteins in 235 species: Archae - 0; Bacteria - 21; Metazoa - 207; Fungi - 173; Plants - 213; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:16368890..16372356 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73656.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 665 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPLLRFRKL SSFSEDTINP KPKQSATVEK PKRRRSGRCS CVDSCCWLIG YLCTAWWLLL FLYHSVPVPA MLQAPESPGT RLSRDGVKAF HPVILVPGIV 101: TGGLELWEGR PCAEGLFRKR LWGASFSEIL RRPLCWLEHL SLDSETGLDP SGIRVRAVPG LVAADYFAPC YFAWAVLIEN LAKIGYEGKN LHMASYDWRL 201: SFHNTEVRDQ SLSRLKSKIE LMYATNGFKK VVVVPHSMGA IYFLHFLKWV ETPLPDGGGG GGPGWCAKHI KSVVNIGPAF LGVPKAVSNL LSAEGKDIAY 301: ARSLAPGLLD SELLKLQTLE HLMRMSHSWD SIVSLLPKGG EAIWGDLDSH AEEGLNCIYS KRKSSQLSLS NLHKQNYSLK PVSRVKEPAK YGRIVSFGKR 401: ASELPSSQLS TLNVKELSRV DGNSNDSTSC GEFWSEYNEM SRESIVKVAE NTAYTATTVL DLLRFIAPKM MRRAEAHFSH GIADDLDDPK YGHYKYWSNP 501: LETKLPEAPE MEMYCLYGVG IPTERSYIYK LATSSGKCKS SIPFRIDGSL DGDDVCLKGG TRFADGDESV PVISAGFMCA KGWRGKTRFN PSGMDTFLRE 601: YKHKPPGSLL ESRGTESGAH VDIMGNVGLI EDVLRIAAGA SGQEIGGDRI YSDVMRMSER ISIKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)