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AT3G43170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.790
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to 90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL353871EMBL:CP002686EnsemblPlants:AT3G43170EnsemblPlants:AT3G43170.1
entrez:823390GeneID:823390Gramene:AT3G43170.1hmmpanther:PTHR31681
HOGENOM:HOG000210024KEGG:ath:AT3G43170PhylomeDB:Q9LXL7PIR:T49231
Proteomes:UP000006548RefSeq:NP_189903.1STRING:3702.AT3G43170.1TAIR:AT3G43170
UniGene:At.53686UniProt:Q9LXL7
Coordinates (TAIR10) chr3:-:15172148..15172754
Molecular Weight (calculated) 14969.30 Da
IEP (calculated) 8.87
GRAVY (calculated) -0.18
Length 133 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSSPEEDD CVVAIKFLVP QLSFADPMKA TPSHLIGSWD LHNAKPNPKF QRLRKIIKGI GKLKTKALMV FKLDEEANAV YTQDMSDLFI YLTKSDPLCV
101: PTNSWIPLPP NRVLILDVDE SRRVSLCRTP SKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)