AT3G42060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.918 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G15420.1); Has 60 Blast hits to 60 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:14251600..14254269 | ||||||||||||||||||||
| Molecular Weight (calculated) | 80063.80 Da | ||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||
| Length | 712 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVAGSWSSNR GCVVVVAEPR GFVVSSRAFV HAPWLRGHGH RTVRFFVPDQ VFIRDLNCKA CCAEPSSWTL NRGWPCDFGL DGPGEIRDAW LGQSGAGDAL 101: PVLTEEEFRD LNGLFVPENA ELRQGPSQPR HGRGKVFEVD ARENARSESR SLIMGLSASR ATSQFCGRRA NKNQAPEGVE ALIPEPHQRP SDCPEGYICL 201: FESYFTEGGL WFPLPEFLTS YCSRRNIAFS QLSVASIRNA IGLVILAAEE RLVVDLDLFE EVTSFSIGVK NRSMVCANSR RGFKIFYGET SRVRDWRKCF 301: FFAKLSDVSV DDTNLSCVNI WNFNPGFVPR HEASSDNTFL SNLSLLCKRS ALSWPHMLEH FIDCSPSCLR MGSCELPRYT DQFDDDEELV CEDEPQVPID 401: EPIHEGSAEA TDTVDVCVVK PEVPNKDRGT EVAAARAGKK VLKETTGSVP FPSVGGSRSR KRDSSRRSPE TGPSNVGKPP RHGTPIRNAV EGVDHSFSFN 501: YDARDHMFHN DGSACAELGR NVRGDFSEFP QVETLLAPDL YRDVCRQKFQ EMSQTNRMVG FYEKKVREVM RERDLLKVAL ETARKSLATS RADRHYEKSR 601: EDAVAVERRK VVTEIEDSHA RIERLRNHII GLRAYSVRKY TLCQVKGVQE CLETMIAKGT AIPESRMKIL AKGRPIWQSK GRCDRGSRDS CKRPRPLPGA 701: AERWGRRHRC VI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)