AT3G32904.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30520.1); Has 249 Blast hits to 117 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 73; Fungi - 5; Plants - 112; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:13451438..13452807 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 38572.90 Da | ||||||||||||||||||||||||
| IEP (calculated) | 8.92 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.02 | ||||||||||||||||||||||||
| Length | 330 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNYRFKDPT ILGREFILDK FNKEFNLNIN YQFVKEKLDQ LKRKYKKYKE LMKNSTGISV DTTTSVISTS NSWWQEREPQ FSVNQRREQL VNDGLDNDEG 101: HVYFETYDGD MQDSQVLETQ ENEEIPTSRI QQRGGLRRGS SSQRGAGNFQ ISTRIGSRGS RRKQSFETTL TDTITGLREF QRQSLQQMRP NCFDKDDYNK 201: FDMAMKLFES MNLPNDTDFY WACIHAFKAE IFWRKYFINR AERTVEDNLK FLQALTRDTR DNEYVGKRQW GHGFQQWGTP PTAPQWNSPS NVPQWTIPPT 301: TPQWGTPSSM PQWSSSPTAP QLSSPPTAPQ |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)