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AT3G32410.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G32410EnsemblPlants:AT3G32410.1entrez:823028
GeneID:823028Gramene:AT3G32410.1hmmpanther:PTHR23213hmmpanther:PTHR23213:SF190
InParanoid:Q3E727KEGG:ath:AT3G32410PaxDb:Q3E727ProteinModelPortal:Q3E727
Proteomes:UP000006548RefSeq:NP_683622.2TAIR:AT3G32410UniGene:At.65206
UniProt:Q3E727
Coordinates (TAIR10) chr3:-:13368435..13369133
Molecular Weight (calculated) 25521.10 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.48
Length 232 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEKDVLPME AFAKVQEIFS EAEWLDPNSD VAVTVFNQIT ATNILQESLD SGSPRSPDSR SLLESTLEKV KEKTKLMIAE NIVSSPDTSS PEWKEKDTMS
101: SHKSYADPNS ILKKVDESRG LRFSVQRNVH SKIFSPRMVQ SPVTSPLPNR SPTQGSPASI SRFHSSPSTL GITSILNDHG TCKGEESTSS SPASPSISFL
201: PTLHPMTPSQ PKNLLHNVHS LPHLFIQMAL LQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)