AT3G32400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Actin-binding FH2/DRF autoregulatory protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Actin-binding FH2/DRF autoregulatory protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (Formin Homology) protein (TAIR:AT2G25050.1); Has 8122 Blast hits to 5350 proteins in 392 species: Archae - 16; Bacteria - 443; Metazoa - 3142; Fungi - 756; Plants - 2255; Viruses - 469; Other Eukaryotes - 1041 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:13356995..13360572 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54149.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.27 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||
| Length | 488 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELLSSIATE GPPPPPPPPL LQPHHSALSS SPLPPPLPPK KLLATTNTPP PPPPPLHSNS QMGAPTSSLV LKSPHNLKGQ GQTRKANLKP YHWLKLTRAV 101: QGSLWAEAQK SDEAATAPDF DISEIEKLFS AVNLSSNSEN NGGKSGRRAR PKVEKVQLIE LKRAYNCEIM LSKVKIPLPD LMSSVLALDE SVIDVDQVDN 201: LIKFCPTKEE AELLKGFIGN KETLGRCEQF FLELLKVPRV ETKLRVFSFK IQFHSQVTDL RRGLNTIHSA TNEASRFFVQ IVRGSTKLKR IMQTILSLGN 301: ALNHGTARGS AIGFHLDSLL KLTDTRSRNI FIFVLAEKLP GLLNFPKDMV SLEAATNIQL KYLAEEMQAT SKGLEKVVQE FTASETDCQI SKHFHMNLKE 401: FLSVAEGEVR SLASLYSTVG GSADALALYF GEDPARVPFE QVVSTLQNFV RIFVRSHEEN CKQVEFEKKR AQKEAENEKL KKGVYNEN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)