AT3G32330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.914 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNA repair protein-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNA repair protein-related; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: ATP-dependent helicase family protein (TAIR:AT3G32280.1); Has 1101 Blast hits to 1099 proteins in 202 species: Archae - 0; Bacteria - 24; Metazoa - 474; Fungi - 348; Plants - 150; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:13276082..13277155 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37189.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.68 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||
| Length | 327 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRVPKDGFSG TGIFPHPFHK MIMKPHHFEI LNFLYKNLVV ENSNGCIIAQ TPLSEKTFLM ISFIYGYLEK HPNSKSLFVL PKWVLNLEVL KRWIKTWSII 101: FLGAKQFSNI VSDNSGAEAS DSCRDILLNI LSVVVFDRGT DPRNEMMSFL KVVSRIKTPH KVLLTGSLYQ NNIKEVFNIL DVAFPEFLKH NQIGKNFRKL 201: LNVEADGPST NLKMPLFDKL EEALLSQDSD HGDKICYLTE LKMLTNKVIY NHKGECLLEV PGLMDFTVVL KPTSSQKSAW EVERKSNGKG FKKYSTLSGI 301: MLHPLLCAFS DRAKGLPAPN EDEMDEM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)