AT3G31910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.906 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Domain of unknown function (DUF1985) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1985 (InterPro:IPR015410); BEST Arabidopsis thaliana protein match is: Ulp1 protease family protein (TAIR:AT5G45570.1); Has 365 Blast hits to 355 proteins in 115 species: Archae - 0; Bacteria - 155; Metazoa - 48; Fungi - 4; Plants - 102; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:12907877..12909614 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 46121.50 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.36 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||
| Length | 399 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNHYCFLSRI GMIKEGLGHD VWDALEKSSI GVFLKLVDVS YTWAAKKVHL FLINQLRVDN FKEIWSLIDV DHREFREAMN VGTSDGPNFT ELQSVIDLSK 101: AWGLKERLIV GRLCLLSVAI HGIHHGSKIP LSSARRVLDP VGFERYPWGR VAFESLINSV KIVDYDKDSY VIQRCVHALV IWIYESVPGL GEIYGMKRDI 201: LTCIPLLDWN SSRKSIKLKD FIKKEKAEHG HVRVRHMIPV SQDNMYPTWR DVEQNAKKDP LLDNLIIDII NDRLPLNAWE GGQAVVVANK KRRVEVQDDL 301: DISTMRNKKK KKVTDFIEEK DEEISKKKKD TLKEDLEKRS VLDVQLSNRI EEVEKDLKEM KESKPDAATS RNDEDDEANS RAPFWIVEDS LAKNRYLNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)