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AT3G30160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.880
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35320.1); Has 9 Blast hits to 9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G30160EnsemblPlants:AT3G30160.1entrez:822707
GeneID:822707GO:GO:0016021Gramene:AT3G30160.1KEGG:ath:AT3G30160
PaxDb:F4J5F2PhylomeDB:F4J5F2Proteomes:UP000006548RefSeq:NP_189635.1
STRING:3702.AT3G30160.1TAIR:AT3G30160TMHMM:TMhelixUniGene:At.53589
UniProt:F4J5F2
Coordinates (TAIR10) chr3:-:11784990..11785377
Molecular Weight (calculated) 9727.89 Da
IEP (calculated) 6.76
GRAVY (calculated) 0.64
Length 91 amino acids
Sequence (TAIR10)
(BLAST)
1: MIICIYLPLH TASSHVFFIT ITSLSHISIP AIIIIVVTPE LTSRCGRKCS TWLVSSPFIA GLLEGNNSSG GIGDPFPVTS EGVWRVLNGS E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)