AT3G29750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Eukaryotic aspartyl protease family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: translation, tRNA aminoacylation for protein translation; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150), Peptidase aspartic (InterPro:IPR021109), Retroviral aspartyl protease (InterPro:IPR013242); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G30770.1); Has 114 Blast hits to 114 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:11579125..11580600 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47684.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.07 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||
| Length | 421 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLNHQPHYS GIQQEGSVRD YRERFEALCL RSVTLPGQGF EEMFLQGLQP SLQTAVRELK PNGINSYQSR QAELMSLTLV QAKLDVVKKK KGVINELEEL 101: EQDSYTLRQG MEQLVIDLTR NKGMRFYGFI LDHKVVVAID SGATDNFILV ELAFSLKLPT SITNQASVLL GQRQCIQSVG TCLGIRLWVQ EVEITENFLL 201: LDLAKTDVDV ILGYEWLSKL GETMVNWQNQ DFSFSHNQQW ITLCAEHEEL EQVTTKVKMK SENEQEDIEE QRNNDGEMLV VSYLEDKVTL KGESKVTCGG 301: IAKEIQGGHD TKENDDEKSF FGQPGVKHSE VVAGSTRNMS TKSEKDQTRS VCVKEPFEVV GLYHPFKTVV SRLMIEFGKE VTQMHVEEMV DKWESSVKKK 401: VAAVGSTEVR TLVQGIHFLP P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)