AT3G29450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.960 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : General transcription factor 2-related zinc finger protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
General transcription factor 2-related zinc finger protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 655 Blast hits to 632 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 335; Fungi - 0; Plants - 320; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:11322669..11324582 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60100.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||
| Length | 522 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNQRHKIFQK IFRKLFQKIC LRILAIGNIF WTIILMKEMR DYTENKGGSD TFVTKGFDTW KNPQSLREHV GLVNSFHNNA LKRADCLMRQ VRQGLPFRGH 101: DESVDSANRE NFLELVKYTA GQNEAVSKIV LENAPKNNQM ACPKIQKDIV HCFAEEVIRS IIQEVDHDVF WLMVDESADI SDKEQMAVKT FFASLKCAID 201: SLFAKLGLSI KQLRGQGYDG ASNMKGEFNG LRSLILRENS SAYYIHCFAH QLQLVVVAVA KKHFEIGDFF DMISVLINVV GASCKRKDRV RDEFRKKLEE 301: RINQGEIKTG KGLNQKLSLQ RPGNTRWGTH YTTLLRLVDL FSVIIKVLEW IEDDGTDSTK RRQANGLLKY FNTFDFVFYL QLMLLILGLT NSLSVALQRK 401: DQDILNAMSL VKSTKQQLFK LRDDGWDSFL NEVFSFCKDH DIEFVIMDGE FVDPRKPRKK SNMTNLHHYQ VECFNTVLDM QIQEFNDPNT SLFARDFNSA 501: SMASFHFGQS LLCVHSSIDV GS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)