AT3G29190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Terpenoid cyclases/Protein prenyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Terpenoid cyclases/Protein prenyltransferases superfamily protein; FUNCTIONS IN: lyase activity, magnesium ion binding; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases/Protein prenyltransferases superfamily protein (TAIR:AT4G20200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:11159373..11163336 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 69671.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.93 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 601 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVISIFGPK HGSLISLHSS YNLFKVSKVT RFRRTLFPSN HAKVFRFKAL TCDNQESNNM FKELPTSEWT HHFHSIQVDV SEMDAIRIEI DALKPKVKNI 101: LMSFQGIDST KKRILMIYML ISLGLACQFE EEIYETLKEG FGKIEEMMAN EEDLYTVSII FWVFRRYGHY ISSDFFRRFK GNDGNFKKSL IGDAKGMLSF 201: YEAANMATTK DYILDEALSF TSSHLESLAA NGACPPHMSR RIRNALNASQ HWNMEMLVAV EYISFYEKEK DHNEMLLKFS KLNFKFLQLQ YLQELKVLTK 301: WYKEVDFVSK LPPYFRDRIV ENHFFIQTLF VESQHSRARI MMAKYFILLV IQDDTLDRYA SLPEAESLVN SLNRWAPDHA MDKQPDYLKF VFKFILDTFE 401: EFEKELRPEG GSFGVCATIE EFKSLVKANL EAEKWALADN MPSFEEYIEV TGVGITAMTT LMGAMMCMGK IVPKEDYKWL KSRPKIIQAL AIKGRLMNDM 501: KGYKEDMSRG YAANAVTCYM KQYRVTEQEA LKEFEKMVAV ANKTVNEEFL TTMGVSRLVL KLAMGVGLMI SITYSEDEGY THPEGKIKEK MTTLFVDQIP 601: L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)