AT3G28070.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.846 What is SUBAcon? |
|
||||||||
| Experimental Localisations and PPI |
|
||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||
| Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||
| Curator Summary (TAIR10) |
|||||||||
| Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G28100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||
| Protein Annotations |
|
||||||||
| Coordinates (TAIR10) | chr3:+:10448455..10450845 | ||||||||
| Molecular Weight (calculated) | 29661.90 Da | ||||||||
| IEP (calculated) | 9.39 | ||||||||
| GRAVY (calculated) | 0.72 | ||||||||
| Length | 268 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MYVITGYIGI EYSSPTLASA INNITPALTF ILAIIFRMEK VSFKERSSLA KLMGTILSLI GALVVIFYHG PRVFLASSPP YVNFRQFSPP LSSSNSDWLI 101: GGALLTMQGI FVSVSFILQA HIMSVYPAAF RVSFLYTVCV SIVTSTIGLV VEKNNPSVWI IHFDITLITI VTMAIVTSVY YVIHSWTVRH KGPLYLAIFK 201: PLSILIAVVM GAIFLNDSLY LGCLIGGILI TLGFYAVMWG KANEEKDQLS FSEKEKTPLL LNRKNDQV |
||||||||
| See Also |
|
||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)