AT3G26920.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.719 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : FBD / Leucine Rich Repeat domains containing protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FBD / Leucine Rich Repeat domains containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: Protein with RNI-like/FBD-like domains (TAIR:AT3G26930.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9921241..9922429 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35116.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.11 | ||||||||||||||||||||||||||||
| Length | 301 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNFGCDPRIM DFEILIGIAF GRQLRKLVLK VYSGDWFKFP TSLYNSETLE TLELYHCILI DVPFPVCLKS LRTLNLHEVE FVNDESVVNL LAGCISLENL 101: VIHQTTDLNV KTFTIAVPSL QRLTVIVEYY EEFSVFVVNT PSLKYLKIEV QRLSLKVSLV EIFSLPPISN TFYHLTYLEL STYKPKWWNL LTLMLDTSPN 201: LQVLKIFDFM TSQEQRPWEK WNEPKNVPEC LLLHLETFVW TCYEGKLENE IELAKYILRN ARRLKKATFS IIEINPDKRV EMVGELKSVV RASNSCQLVF 301: I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)