AT3G26850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : histone-lysine N-methyltransferases | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 88; Viruses - 5; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:9896541..9897415 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29576.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.17 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.86 | ||||||||||||||||||||||||||||
| Length | 265 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTFQTEVPDD GSRQASSSPY SGKGKIVPEC GLVGDMYDPF VDSFEPASVK LDCVQEHEPD NDLCIVPKAS ISSNRPLSME ENNQAVDKEP LCESEMTARV 101: SVSSNKPADV EENTAGIEIG EVVSGEDDEF GKNVDDGREC NSHETLTPNS DNENPKVENN VHEGDNTRKK SREKSKERDS SRSMKLFKVV LTKFVKDLLK 201: PSWRQGNMSK EAFKTIVKRV VDKVSNSMEG RRIPKSRAKI DKYIDSSQQK LTKLVMGYVD KYVKA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)