AT3G26430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9674419..9675889 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42064.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.08 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||
| Length | 380 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METNLLLVKC VLLASCLIHP RACSPSCNFP AIFNFGDSNS DTGGLSASFG QAPYPNGQTF FHSPSGRFSD GRLIIDFIAE ELGLPYLNAF LDSIGSNFSH 101: GANFATAGST VRPPNATIAQ SGVSPISLDV QLVQFSDFIT RSQLIRNRGG VFKKLLPKKE YFSQALYTFD IGQNDLTAGL KLNMTSDQIK AYIPDVHDQL 201: SNVIRKVYSK GGRRFWIHNT APLGCLPYVL DRFPVPASQI DNHGCAIPRN EIARYYNSEL KRRVIELRKE LSEAAFTYVD IYSIKLTLIT QAKKLGFRYP 301: LVACCGHGGK YNFNKLIKCG AKVMIKGKEI VLAKSCNDVS FRVSWDGIHF TETTNSWIFQ QINDGAFSDP PLPVKSACTR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)