AT3G26125.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 86, subfamily C, polypeptide 2 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein with cytochrome P450 domain | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 86, subfamily C, polypeptide 2 (CYP86C2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily C, polypeptide 3 (TAIR:AT1G13140.1); Has 28302 Blast hits to 28205 proteins in 1472 species: Archae - 44; Bacteria - 2411; Metazoa - 10772; Fungi - 6177; Plants - 7833; Viruses - 3; Other Eukaryotes - 1062 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9551812..9553437 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62805.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.84 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||
| Length | 541 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSNENSVMSL IDRISGHLCL QDVSIALLGL FLFGCLQAKL TNKGEPVQWP VFGITPEFFL HVHDMFGWVT RCLTKSRGTF PYQGIWFSGS YGAMTSVPAN 101: IEYMLKTNFK NFPKGEFYKE RFRDLLEDGI FNADDESWKE QRRIIITEMH STRFVDHSFQ TTRDLIERKL LKVMESFSKS QEAFDLQEIL LRLTFDNICI 201: AGLGDDPGTL DDDLPHVPFA KAFEEATEST LFRFMIPPFV WKPMKFFDIG YEKGLREAVE TVHNFIDKMV VERIAMLKDQ GTLANSKSDV LSRLIQIESH 301: KRGDENDRFT AKFFRQFCTS FILAGRDTSS VALTWFFWLI TKHPEVETKI LHEIREILNQ REKNKYKLDE TGEKESSRHF TVKELNDMVY LQAALSESLR 401: LYPPIPMEMK QATEEDVFPD GTFLRKGSRV YFSVYAMGRM ESIWGKDCEM FKPERWIQGG QYVSDDQFKY VVFNAGPRLC LGKTFAYLQM KMVAASILLN 501: YSIKVDQDHV VVPRVTTTLY MKHGLKVRIT PRSLEEKKQD S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)