AT3G26080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : plastid-lipid associated protein PAP / fibrillin family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26070.1); Has 376 Blast hits to 374 proteins in 78 species: Archae - 0; Bacteria - 85; Metazoa - 0; Fungi - 0; Plants - 276; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9528998..9530404 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26250.10 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.14 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||
| Length | 234 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALPWCLKTG VLTSPAAGFN HPSDSGFAVP TKLLSIRKGD RERLRIQAVF SFPPRNGGAE KRKQLKHELV EAIEPLERGA TASPDDQLLI DQLARKVEAV 101: NPTKEPLKSD LINGKWELIY TTSAAILQAK KPRFLRSLTN YQCINMDTLK VQRMETWPFY NSVTGDLTPL NSKTVAVKLQ VFKILGFIPV KAPDGTARGE 201: LEITYVDEEL RISRGKGNLL FILKMFDPTY RIPL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)