AT3G26020.4
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.500 nucleus 0.500 ASURE: cytosol,nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein phosphatase 2A regulatory B subunit family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1197 Blast hits to 1175 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 578; Fungi - 161; Plants - 301; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9514363..9516585 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60781.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.07 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||
| Length | 529 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV 101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP 201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII 301: NGFALPLKDE HKFVEKDCKL ADTVIRGLLK YWPVTNSSKE VMFLNELEEV LEATQPPEFQ RCMVPLFRQI ARCLNSLHFQ AISFRHTLTA LLMRSRYSLP 401: VISNEQMEEL ILRYGKYQCL GLLYSALGVA ERALFLWNNN HIENLIMQNR KVILPIIFPA LERNAQKHWN QAVHSLTLNV RKIFHDLDPE LFKECLAKFK 501: EDESKAAETE AKREATWKRL EELGVRKAS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)