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AT3G25880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.362
peroxisome 0.326
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to auxin stimulus, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G05180.1); Has 319 Blast hits to 319 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 156; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0476eggNOG:KOG2016EMBL:CP002686EnsemblPlants:AT3G25880
EnsemblPlants:AT3G25880.1entrez:822183Gene3D:3.40.50.720GeneID:822183
GO:GO:0008641Gramene:AT3G25880.1hmmpanther:PTHR10953InterPro:IPR000594
InterPro:IPR016040KEGG:ath:AT3G25880PaxDb:F4JBA2Pfam:PF00899
ProteinModelPortal:F4JBA2Proteomes:UP000006548RefSeq:NP_189217.1SMR:F4JBA2
STRING:3702.AT3G25880.1SUPFAM:SSF69572TAIR:AT3G25880UniGene:At.53497
UniProt:F4JBA2
Coordinates (TAIR10) chr3:-:9469713..9470033
Molecular Weight (calculated) 7614.44 Da
IEP (calculated) 8.21
GRAVY (calculated) 0.11
Length 69 amino acids
Sequence (TAIR10)
(BLAST)
1: MMEPKAKYDR QLMYTIQGTL EEASICLLNC GPIGSNALKN LVLGGVGSIT IVEGSKVLIG DIWKQFHRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)