AT3G25840.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G13350.1); Has 128768 Blast hits to 102988 proteins in 2920 species: Archae - 165; Bacteria - 11507; Metazoa - 55869; Fungi - 16191; Plants - 15087; Viruses - 722; Other Eukaryotes - 29227 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:9452993..9456322 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77399.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.57 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.97 | ||||||||||||||||||||||||||||||||||||||||
| Length | 673 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDREGSIRDR DSEGSKRRDK DSDRRRERER EKRREIESDR ERRKEKERER SIDRDRRKER EGDYLRDRAN ERGRSRDRTR YNSRERKREK EREGEKDWER 101: GRETQKDREK YISSDVDYGE MRHKQSRNTR YDAVDDLEMR KPNSLKAHNS KGDKLEETWA NDERSRNEDG QDDNDEGLTW KSPEEEEEEL LNRIKEESRK 201: RMEAILEKHK RKPEQQNELL TQDNGKDIVP ETGAPVSTSP AVVIAANVGQ AKTNLDFDTV AAKAPLIAGG PPTMSGISDS EKNQAQAGLG EGSPKSERSA 301: DMFHDDIFGE SPAGIRKVGG KGDGVPMVRS GLHDNWDDAE GYYSYQFGEL LDGRYEVIAT HGKGVFSTVV RAKDLKAGPA EPEEVAIKII RNNETMHKAG 401: KIEVQILKKL AGADREDRRH CVRFLSSFKY RNHLCLVFES LHLNLREVLK KFGRNIGLQL SAVRAYSKQL FIALKHLKNC GVLHCDIKPD NMLVNEGKNV 501: LKLCDFGNAM FAGKNEVTPY LVSRFYRSPE IILGLTYDHP LDIWSVGCCL YELYSGKVLF PGATNNDMLR LHMELKGPFP KKMLRKGAFI DQHFDHDLNF 601: YATEEDTVSG KLIKRMIVNV KPKDFGSIIK GYPGEDPKIL AHFRDLLDKM FILDPERRLT VSQALAHPFI TGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)