AT3G25820.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.985 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : terpene synthase-like sequence-1,8-cineole | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
terpene synthase-like sequence-1,8-cineole (TPS-CIN); CONTAINS InterPro DOMAIN/s: Terpene synthase, metal-binding domain (InterPro:IPR005630), Terpenoid synthase (InterPro:IPR008949), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Terpene synthase-like (InterPro:IPR001906); BEST Arabidopsis thaliana protein match is: terpene synthase-like sequence-1,8-cineole (TAIR:AT3G25830.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9439282..9442507 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52879.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.01 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 444 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL 101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT 201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ 301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI 401: DVIPYLKKSW AELCRTYLVE ERGYKRGMQT KLGRIHAKCL DFNC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)