AT3G24360.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.904 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP-dependent caseinolytic (Clp) protease/crotonase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 22029 Blast hits to 22019 proteins in 1814 species: Archae - 358; Bacteria - 15169; Metazoa - 927; Fungi - 600; Plants - 484; Viruses - 0; Other Eukaryotes - 4491 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8839832..8842799 | ||||||||||||
| Molecular Weight (calculated) | 45316.20 Da | ||||||||||||
| IEP (calculated) | 6.19 | ||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||
| Length | 414 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST 101: SRAFCAGGDV KQITSKNQLS DMIEVFTAEY SLICKIAGYR KPYISLMDGI TMGFGLGLSG HGRYRVITER TVLAMPENGI GLFPDVGFSY IAAHSPGEGS 201: VGAYLGMTGR RISTPSDALF VGLGTHYVPS GKLGSLREAI LSADLSKDPQ QHIQATLSNY SSDPETESHL QMLLPQIESA FSVSKSVKET IEELKKFQQS 301: SEASVAEWAN EAVQGIEKGA PFSLYLTHKY FSKVACAKGK TNNAMATLNG VMITEYRIAL RSALRSDFTE GVRAVLTDKD QNPKWKPASL DEVDETEVDA 401: LFMPLSPEFE ELNV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)