AT3G23610.3
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.784 What is SUBAcon? |
|||||||||
| Experimental Localisations and PPI |
|
||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||
| Description (TAIR10) | protein_coding : dual specificity protein phosphatase 1 | ||||||||
| Curator Summary (TAIR10) |
Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding. | ||||||||
| Computational Description (TAIR10) |
dual specificity protein phosphatase 1 (DSPTP1); CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase (InterPro:IPR020417), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3). | ||||||||
| Protein Annotations |
|
||||||||
| Coordinates (TAIR10) | chr3:+:8478280..8479651 | ||||||||
| Molecular Weight (calculated) | 25494.70 Da | ||||||||
| IEP (calculated) | 9.99 | ||||||||
| GRAVY (calculated) | -0.31 | ||||||||
| Length | 228 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSRDRGSPS SSSSSSSLPG IEKYNEKVKN QIQALVRVIK VARTYRDDNV PSLIEQGLYL GSVAAASNKN VLKSYNVTHI LTVASSLRPA HPDDFVYKVV 101: RVVDKEDTNL EMYFDECVDF IDEAKRQGGS VLVHCFVGKS RSVTIVVAYL MKKHGMTLAQ ALQHVKSKRP VASPNAGFIR QLQDLEKSMQ VVVEEKTVPC 201: KYLLHASSFF SIKQGSKLRL HNVRREDH |
||||||||
| See Also |
|
||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)