AT3G23360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.611 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein phosphatase 2C family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G15260.2); Has 1649 Blast hits to 1645 proteins in 226 species: Archae - 0; Bacteria - 36; Metazoa - 401; Fungi - 135; Plants - 907; Viruses - 0; Other Eukaryotes - 170 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8355257..8356381 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29613.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.50 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||
| Length | 260 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFLDLPFML KAFRFRRLVV EDGKRRKKKK PLWLTPVSHG YYTVDRLSYA DNSSNDDSVF VQREQQSDEL EIWLFGVSNA GTGKEIVKYM QNHLFDKLPN 101: ELGIMRKCKE TMRRAYVEEE RTGGSAASVM VVNGEKLAIA SIGDHRVVVC KDGEAHQIRD RKASTKHWSQ FIFPVCNQGE EEDESDPRNS ELVVITEKIN 201: SDTEFIIIGS PGIWEVMKSQ EAINLIRHIE DPKEAAKCLA KEALNRISKS SISCVVIRFG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)