AT3G21620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ERD (early-responsive to dehydration stress) family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ERD (early-responsive to dehydration stress) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT4G15430.2); Has 1522 Blast hits to 1336 proteins in 200 species: Archae - 0; Bacteria - 0; Metazoa - 191; Fungi - 725; Plants - 435; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7611044..7614041 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86691.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.44 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.19 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 756 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATLTDIGVA ATINILTAFA FFIAFAILRL QPVNDRVYFP KWYLKGLRSS PIKTGGFASK FVNLDFRSYI RFLNWMPQAL RMPEPELIDH AGLDSVVYLR 101: IYLLGLKIFF PIACIAFTVM VPVNWTNSTL DQLKNLTFSD IDKLSISNIP TGSSRFWVHL CMAYVITFWT CFVLQREYKH IASMRLQFLA SEHRRPDQFT 201: VLVRNIPPDP DESVSELVEH FFKVNHPDYY LTYQAVYNAN KLSELVQKRM KLQNWLDYYQ NKHSRNPSKR PLIKIGFLGC WGEEVDAIDH YIEKIEGLTR 301: KISEEKETVM SSTKSLVPAA FVSFKKRWGA VVCSQTQQSR NPTEWLTEWA PEPRDIYWDN LALPYVQLTI RRLVIAVAFF FLTFFFMIPI AFVQTLANIE 401: GIEKAVPFLK PLIEVKTVKS FIQGFLPGIA LKIFLIVLPS ILMLMSKFEG FISKSSLERR CASRYYMFQF INVFLCSIIA GTALQQLDSF LNQSATEIPK 501: TIGVSIPMKA TFFITYIMVD GWAGVAGEIL RLKPLIIYHL KNFFLVKTEK DREEAMDPGT IGFNTGEPQI QLYFILGLVY AAVSPILLPF ILVFFALAYV 601: VYRHQIINVY NQEYESAAAF WPDVHRRVVI ALIVSQLLLM GLLSTKKAAR STPLLFILPV LTIGFHKFCQ GRYQPIFVTY PLQDAMVKDT LERMREPNLN 701: LKTFLQNAYA HPVFKAADNL ANEMVVEEPA PDKTPDLVAT KRGSRRFNSG SAETFT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)