AT3G21530.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNAse I-like superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7582828..7584448 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52028.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.85 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||
| Length | 458 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLCVFRRKLG CLFSRLRWVI KKRVRARVIV RRFRKARWRA RRKESPESEV SSIHLSSNSG RHIRVATFNV AMFSLAPVVQ TMEETAFLGH LDSSNITCPS 101: PKGILKQSPL HSSAVRKPKV CINLPDNEIS LAQSYSFLSM VENDNDGKEN RGSLSMRSPV CLPSCWWDQE SFNGYSSRRS IAELLRELDA DILALQDVKA 201: EEETLMKPLS DLASALGMKY VFAESWAPEY GNAILSKWPI KKWRVQRIAD VDDFRNVLKV TVEIPWAGDV NVYCTQLDHL DENWRMKQID AITRGDESPH 301: ILLGGLNSLD GSDYSIARWN HIVKYYEDSG KPTPRVEVMR FLKGKGYLDS KEFAGECEPV VIIAKGQNVQ GTCKYGTRVD YILASPESPY EFVPGSYSVV 401: SSKGTSDHHI VKVDLVITKE RSRGNFKHSR KKAKQKIFQI KANLMSKDTW KLGNLMSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)