AT3G20950.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.952 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 32 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP705A | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 32 (CYP705A32); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 30 (TAIR:AT3G20940.1); Has 33569 Blast hits to 33416 proteins in 1691 species: Archae - 50; Bacteria - 3918; Metazoa - 11596; Fungi - 7324; Plants - 9333; Viruses - 3; Other Eukaryotes - 1345 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7342675..7344744 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59440.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.00 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 526 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAMITVDFQ NSFIFILFCL FSLICYSLFF RKPKDSRAGR DLPPSPPSFP VGSPQSNNLH LLLSALVHKS FQKISYKYGP LLHLRVFHVP IVLASSASVA 101: YEIFKAQDVN VSSRGHAPAG ESLLFGSSSF FFAPYGDYFK FMRKLIATKL LGPQALERSR KIRADELDRF YRNLLDKAMK KESVDIVEEA AKLNNNIICK 201: MIMGRSCSED NGEAERVRGL VIESTALTKQ IFLGMIFDKP LKKLGISLFQ KDIKSVSRFD ELLEKILVEH EERMGKHYKA NDMMDLLLEA YGDENAEYKI 301: TRNHIKSLFV DLVIAGTDTS AQTIEWTMAE LINNPNILER LREEIESVVG NTRLVQETDL PNLPYLQAVV KEGLRLHPPG AVFLRTFQER CELKGFYIPE 401: KTLLVVNVYA IMRDPKLWED PEEFKPERFI ASSRSGQEDE IREEVLKYMP FSTGRRGCPG SNLAYVSVGT AIGVMAQCFD WRIKGEKVNM NEAAGTLVLT 501: MAQPLMCTPG PRTLNPLPSS LHVPIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)