AT3G20935.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.915 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 705, subfamily A, polypeptide 28 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
cytochrome P450, family 705, subfamily A, polypeptide 28 (CYP705A28); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 30 (TAIR:AT3G20940.1); Has 33701 Blast hits to 33614 proteins in 1662 species: Archae - 50; Bacteria - 3649; Metazoa - 12253; Fungi - 7319; Plants - 9173; Viruses - 3; Other Eukaryotes - 1254 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7334770..7335912 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39534.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.38 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 348 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIMGRSCSEK NGEAERVRGL VIESLALSPK IFLGMIFHKP LKKLGISLFQ KDIKSVSPKF DELLEKFLVE HEEKMEEDHY KANDMMDLLL EAMEMRMQNV 101: NLCIKRVSNT KARKPPILFR YGKYSNNSLL LQELLVAGTD TSALATQWTM AELINNPTIL ERLREEIESV VGNTRLIQET DLSNLPYLQS VVKEGLRLHP 201: PASISVRMSQ ERCELGGFYI PEKTLLVVNT YAIMRDPNFW EDPEEFKPER FITSSRSEQE DEMREEVLKY IPFSAGRRGC PGSNLAYVSL GIAIGVMVQC 301: FDWRIKGEKV NMSETAGTIM LAMAQPLKCT PVPRTLNLLP SSLHIPSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)