AT3G20020.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.761 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein arginine methyltransferase 6 | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein arginine methyltransferase 6 (PRMT6); FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity; INVOLVED IN: protein amino acid methylation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal L11 methyltransferase, PrmA (InterPro:IPR010456); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 1A (TAIR:AT2G19670.1); Has 2687 Blast hits to 2666 proteins in 709 species: Archae - 44; Bacteria - 791; Metazoa - 996; Fungi - 246; Plants - 285; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6984055..6987945 | ||||||||||||
| Molecular Weight (calculated) | 45930.00 Da | ||||||||||||
| IEP (calculated) | 5.41 | ||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||
| Length | 413 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQSGGDFSNG FHGDHHRELE LEDKQGPSLS SFGRAKKRSH AGARDPRGGL ANVLRVSDQL GEHKSLETSE SSPPPCTDFD VAYFHSYAHV GIHEEMIKDR 101: ARTETYREAI MQHQSLIEGK VVVDVGCGTG ILSIFCAQAG AKRVYAVDAS DIAVQDVEID EEVDVIISEW MGYMLLYESM LGSVITARDR WLKPGGLILP 201: SHATLYMAPI SHPDRYSHSI DFWRNVYGID MSAMMQLAKQ CAFEEPSVES ISGENVLTWP EVVKHIDCKT IKIQELDSVT ARYKFNSMMR APMHGFAFWF 301: DVEFSGPASS PAKNTSETSI ASGSSSISPS GEVNQKKRTN PSDALVLSTS PESPPTHWQQ TIVYFYDPID VEQDQVIEGS VTLSQSKENK RFMNIHLEYS 401: SAGRSFVKES VMR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)