AT3G18070.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : beta glucosidase 43 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
beta glucosidase 43 (BGLU43); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: B-S glucosidase 44 (TAIR:AT3G18080.1); Has 11267 Blast hits to 10950 proteins in 1466 species: Archae - 142; Bacteria - 7742; Metazoa - 714; Fungi - 202; Plants - 1468; Viruses - 0; Other Eukaryotes - 999 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:6187294..6189947 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57246.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 501 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFLFLLLLSA SRSGEESPSG DAVPLATGGL NRKSFPEGFL FGTATSAYQV EGETHQDGRG PSIWDAFVKI PGKIANNATA EITVDQYHRY KEDVDLMQNL 101: NIDAYRFSIS WSRIFPEGSG KINSNGVAYY NRLIDYLIEK GITPYANLYH YDLPLALEQK YQGLLSKQGR FCGLRRVLFQ TFGDRVKNWM TFNEPRVVAA 201: LGYDNGIFAP GRCSEAFGNC TDGNSATEPY IVAHHLILAH AAAVQRYRQN YQEKQKGRVG ILLDFVWFEP LTSSQADNDA AQRARDFHVG WFIHPIVYGE 301: YPNTLQNIVK ERLPKFTEEE VKMVKGSIDF VGINQYTTYF MSDPKISTTP KDLGYQQDWN VTFNFAKNGT PIGPRAHSEW LYNVPWGMYK ALMYIEERYG 401: NPTMILSENG MDDPGNITLT QGLNDTTRVK YYRDYLVQLK KAVDDGANLT GYFAWSLLDN FEWLSGYTSR FGIVYVDYKD LKRYPKMSAL WFKQLLKRDQ 501: K |
||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)