AT3G16520.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-glucosyl transferase 88A1 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7478 Blast hits to 7428 proteins in 453 species: Archae - 0; Bacteria - 251; Metazoa - 2051; Fungi - 26; Plants - 4970; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:5618847..5620833 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49540.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.09 | ||||||||||||||||||||||||||||||||
| Length | 446 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV 101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI 201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ 301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS 401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)