AT3G14990.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Class I glutamine amidotransferase-like superfamily protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Class I glutamine amidotransferase-like superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: response to cadmium ion, thiamin biosynthetic process; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT1G53280.1); Has 10809 Blast hits to 6441 proteins in 1899 species: Archae - 334; Bacteria - 9077; Metazoa - 525; Fungi - 83; Plants - 359; Viruses - 0; Other Eukaryotes - 431 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5047683..5049621 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 39480.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.07 | ||||||||||||||||||||||||
| GRAVY (calculated) | 0.06 | ||||||||||||||||||||||||
| Length | 369 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MITVLRRGGA DVTVASVETQ VGVDACHGIK MVADTLLSDI TDSVFDLIVL PGGLPGGETL KNCKSLENMV KKQDSDGRLN AAICCAPALA LGTWGLLEGK 101: KATGYPVFME KLAATCATAV ESRVQIDGRI VTSRGPGTTI EFSITLIEQL FGKEKADEVS SILLLRPNPG EEFTFTELNQ TNWSFEDTPQ ILVPIAEESE 201: EIEAIALVDI LRRAKANVVI AAVGNSLEVE GSRKAKLVAE VLLDEVAEKS FDLIVLPGGL NGAQRFASCE KLVNMLRKQA EANKPYGGIC ASPAYVFEPN 301: GLLKGKKATT HPVVSDKLSD KSHIEHRVVV DGNVITSRAP GTAMEFSLAI VEKFYGREKA LQLGKATLV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)