AT3G14640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.987 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 72, subfamily A, polypeptide 10 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
putative cytochrome P450 | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 72, subfamily A, polypeptide 10 (CYP72A10); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 72, subfamily A, polypeptide 15 (TAIR:AT3G14690.1); Has 32136 Blast hits to 32015 proteins in 1625 species: Archae - 62; Bacteria - 4981; Metazoa - 11360; Fungi - 6183; Plants - 8149; Viruses - 3; Other Eukaryotes - 1398 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4919856..4921787 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58525.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.62 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||||||
| Length | 514 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEISVACVTV SVVVVVVSWW VWRTLQWVWF KPKMLESYLR RQGLAGTPYT PLIGDLKRNV NMLTEATSKP IKLTEDITPR VLPHPFQMLK THGRTFFTWL 101: GPKPTITIMD PELIKEVFNK VYDYPKAQTF LLGRLIATGI INYDGDKWAK HRRIINPAFH IEKIKNMVPA FHQSCSDVVG EWSKLVSDKG SSSCEVDVWP 201: WLVSMTGDVI SRTAFGSSYK EGQRIFELQA ELVHLILQAF WKVYIPGYRY LPTKSNRRMK AAAREIQVIL KGIVNKRLRA REAGKAAPND DLLGILLESN 301: LGQAKGNGMS TEDVMEECKL FYFAGQETTS VLLVWAMVLL SHHQDWQARA REEVKQVFGD KEPDTECLSQ LKVMTMILYE VLRLYPPVTH LTRAIDKEMK 401: LGDLTLPAGV HISLPIMLVQ RDPMLWGTDA AEFKPERFKD GLSKATKSQV SFFPFAWGPR ICIGQNFAML EAKMAMALIL QTFTFELSPS YVHAPQTVVT 501: IHPQFGAHLI LRKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)