AT3G14570.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.812 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glucan synthase-like 4 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein similar to callose synthase | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glucan synthase-like 4 (GSL04); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4892643..4902628 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 225349.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.80 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||
| Length | 1950 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSHEIVPVDP IDVPSTSYSR PILGPREDSP ERATEFTRSL TFREHVSSEP FDSERLPATL ASEIQRFLRI ANLVESEEPR IAYLCRFHAF EIAHHMDRNS 0101: TGRGVRQFKT SLLQRLELDE EFTVRRRKEK SDVRELKRVY HAYKEYIIRH GAAFNLDNSQ REKLINARRI ASVLYEVLKT VTSGAGPQAI ADRESIRAKS 0201: EFYVPYNILP LDKGGVHQAI MHLPEIKAAV AIVRNTRGLP PPEEFQRHQP FLDLFEFLQY AFGFQNGNVA NQREHLILLL SNTIIRQPQK QSSAPKSGDE 0301: AVDALMKKFF KNYTNWCKFL GRKNNIRLPY VKQEALQYKT LYIGLYLLIW GEASNLRFMP ECLCYIFHHM AYELHGVLTG AVSMITGEKV APAYGGGHES 0401: FLADVVTPIY MVVQKEAEKN KNGTADHSMW RNYDDLNEFF WSLECFEIGW PMRPEHDFFC VESSETSKPG RWRGMLRFRK QTKKTDEEIE DDEELGVLSE 0501: EQPKPTSRWL GKTNFVETRS FWQIFRSFDR MWSFFVLSLQ ALIIMACHDV GSPLQVFNAN IFEDVMSIFI TSAILKLIKG ILDIIFKWKA RNTMPINEKK 0601: KRLVKLGFAA MWTIILPVLY SHSRRKYICY FTNYKTWLGE WCFSPYMVAV TIYLTGSAIE LVLFFVPAIS KYIETSNHGI FKTLSWWGQP RLYVGRGMQE 0701: TQVSQFKYTF FWILVLLTKF AFSYAFEIKP LIEPTRLIMK VGVRNYEWHE IFPEVKSNAA AIVAVWAPIM VVYFMDTQIW YSVYCTIFGG LYGVLHHLGE 0801: IRTLGMLRGR FHTLPSAFNA SLIPHSTKDE KRRKQRGFFP FNLGRGSDGQ KNSMAKFVLV WNQVINSFRT EDLISNKELD LMTMPLSSEV LSGIIRWPIF 0901: LLANKFSTAL SIAKDFVGKD EVLYRRIRKD EYMYYAVKEC YESLKYILQI LVVGDLEKKI ISGIINEIEE SIRQSSLLEE FKMAELPALH DKCIELVQLL 1001: VEGSAEQLQV EKSEELHGKL VKALQDIFEL VTNDMMVHGD RILDLLQSRE GSGEDTDSAS LSEQIQRFLL LLTVKDSAMD IPENLDARRR LSFFATSLFM 1101: DMPDAPKVRN MMSFSVLTPH YQEDINYSTN ELHSTKSSVS IIFYMQKIFP DEWKNFLERM GCDNLDALKK EGKEEELRNW ASFRGQTLSR TVRGMMYCRE 1201: ALKLQAFLDM ADDEDILEGY KDVERSNRPL AAQLDALADM KFTYVVSCQM FGAQKSSGDP HAQDILDLMI KYPSLRVAYV EEREEIVLDV PKKVYYSILV 1301: KAVNGFDQEI YRVKLPGPPN IGEGKPENQN HAIVFTRGEA LQTIDMNQDH YLEEAFKMRN LLQEFLRNRG RRPPTILGLR EHIFTGSVSS LAWFMSYQET 1401: SFVTIGQRLL ANPLRVRFHY GHPDVFDRIF HITRGGISKS SRTINLSEDV FAGYNTTLRR GCITYNEYLQ VGKGRDVGLN QISKFEAKVA NGNSEQTISR 1501: DIYRLGQRFD FFRMLSCYFT TIGFYFSSLI SVIGIYIYLY GQLYLVLSGL QKTLILEAKV KNIKSLETAL ASQSFIQLGL LTGLPMVMEI GLEKGFLIAF 1601: QDFILMQLQL AAFFFTFSLG TKTHYFGRTI LHGGAKYRPT GRKVVVFHAN FSENYRLYSR SHFIKGFELM ILLVVYELFK HTSQSNMAYS FITFSVWFMS 1701: FTWLCAPFLF NPSGFTWEII VGDWRDWNRW IKEQGGIGIQ QDKSWQSWWN DEQAHLRGSG VGARCLEIIL SLRFFVYQYG LVYHLDITQS NTNIIVYALS 1801: WVVILATFFT VKAVDLGRQL FSTRKHLVFR FFKVFVFVSI LTIIITLANI CHLSVKDLLV SCLAFLPTGW GLILIAQAVR PKIEGTSLWE FTQVLARAYD 1901: YGMGVVLFAP MAILAWLPII SAFQTRFLFN EAFNRRLQIQ PILAGKKKNR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)