AT3G14510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.947 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Polyprenyl synthetase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Polyprenyl synthetase family protein; INVOLVED IN: isoprenoid biosynthetic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: geranylgeranyl pyrophosphate synthase 3 (TAIR:AT3G14550.1); Has 16768 Blast hits to 16761 proteins in 2954 species: Archae - 342; Bacteria - 9432; Metazoa - 303; Fungi - 466; Plants - 462; Viruses - 13; Other Eukaryotes - 5750 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4867378..4868305 | ||||||||||||
| Molecular Weight (calculated) | 30650.40 Da | ||||||||||||
| IEP (calculated) | 5.44 | ||||||||||||
| GRAVY (calculated) | 0.12 | ||||||||||||
| Length | 284 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLSTFRSVP LREPLTVQEA VRYSLLAGGK RVRPLLCIAV CELVGGDEAT AMSAACAVEM IHTSSLIHDD LPCMDNADLR RGKPTNHKVF GEDMAVLAGD 101: ALLALAFEHM TVVSSGLVAS ERMIRAVVEL ARAIGTKGLV AGQVVDLSSE RLNPHDVGLE RLEFIHLHKT AALLEAAAVI GAIMGGGTEE EIEKLRKYAR 201: CIGLLFQVVD DILDVTKSTE ELGKTAGKDV MAGKLTYPRL IGLERSREVA EKLSREAEEQ LLGFESDKAA PLVALASYIS CRND |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)