AT3G14480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glycine/proline-rich protein | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glycine/proline-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 20494 Blast hits to 7306 proteins in 684 species: Archae - 14; Bacteria - 4719; Metazoa - 7433; Fungi - 835; Plants - 4684; Viruses - 419; Other Eukaryotes - 2390 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:4862153..4862680 | ||||||||||||||||
| Molecular Weight (calculated) | 16877.30 Da | ||||||||||||||||
| IEP (calculated) | 8.50 | ||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||
| Length | 175 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDLVIALVA FAVLFVVFII LSCIMGGEKD VHSPPPLPRP GQLRMPVYRT KDKDLGGDGT AISVAGTDIY GGSGVGSGGH GGRGIITSDT KLPSPPPPSP 101: LPPRPVQRPK SVSRTKDREL IDTGTAMLVA SSLLTSGSAS SCSGGGSHGH GCGGGGGGGG GGLGGGGCGG GGCGG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)