suba logo
AT3G14395.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.908
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JX19eggNOG:ENOG41104E2EMBL:AY088674EMBL:BT026397
EMBL:CP002686EnsemblPlants:AT3G14395EnsemblPlants:AT3G14395.1entrez:820661
GeneID:820661Gramene:AT3G14395.1hmmpanther:PTHR35101hmmpanther:PTHR35101:SF2
HOGENOM:HOG000148642IntAct:Q8L923KEGG:ath:AT3G14395OMA:AHYAKIN
Proteomes:UP000006548RefSeq:NP_566485.1TAIR:AT3G14395UniGene:At.39244
UniGene:At.6074UniProt:Q8L923
Coordinates (TAIR10) chr3:+:4811044..4811271
Molecular Weight (calculated) 8352.71 Da
IEP (calculated) 5.81
GRAVY (calculated) -0.38
Length 75 amino acids
Sequence (TAIR10)
(BLAST)
1: METVKTSRFT TEVAPAKFIS ATREPFKNML TTISEEDFDF DELVRATAER LSSSCPGSSS WSLAHYAKIN RVSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)