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AT3G12230.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : serine carboxypeptidase-like 14
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serine carboxypeptidase-like 14 (scpl14); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 15 (TAIR:AT3G12240.1); Has 3660 Blast hits to 3566 proteins in 378 species: Archae - 0; Bacteria - 216; Metazoa - 635; Fungi - 834; Plants - 1566; Viruses - 0; Other Eukaryotes - 409 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G12230-MONOMEREC:3.4.16.-eggNOG:COG2939eggNOG:KOG1282
EMBL:AC069472EMBL:AP002047EMBL:CP002686EnsemblPlants:AT3G12230
EnsemblPlants:AT3G12230.1entrez:820403ESTHER:arath-SCP14Gene3D:3.40.50.1820
GeneID:820403Genevisible:Q9C7D3GO:GO:0004180GO:GO:0005576
GO:GO:0016747GO:GO:0019748Gramene:AT3G12230.1hmmpanther:PTHR11802
hmmpanther:PTHR11802:SF29HOGENOM:HOG000198297InParanoid:Q9C7D3InterPro:IPR001563
InterPro:IPR029058KEGG:ath:AT3G12230KO:K16296MEROPS:S10.A02
OMA:QWANDESPANTHER:PTHR11802PaxDb:Q9C7D3Pfam:PF00450
Pfam:Q9C7D3PhylomeDB:Q9C7D3PRIDE:Q9C7D3PRINTS:PR00724
PRO:PR:Q9C7D3ProteinModelPortal:Q9C7D3Proteomes:UP000006548RefSeq:NP_187831.1
SMR:Q9C7D3STRING:3702.AT3G12230.1SUPFAM:SSF53474TAIR:AT3G12230
tair10-symbols:scpl14UniGene:At.53276UniProt:Q9C7D3
Coordinates (TAIR10) chr3:-:3899431..3901879
Molecular Weight (calculated) 49022.50 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.25
Length 435 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSWIPKLLL LQLVLLLTKH ADSSSIIKYL PGFEGPLPFE LETGYIGVGD EDEDQMFYYF IKSESNPEED PLLVWLSGGP GCSSFTGLVY ENGPLGFKVE
101: AYNGSIPTLV STTYSWTKVA NIIYLDQPVG AGFSYSRNPF ADRPSDTGSA KLVNEFVRKW LAKHPDYFSN PFYVTGNSYS GKVIPAIVQE ISNGNYICCK
201: PQINLQGYVI GNPVAYYDHD KDSRIPFAHG VALISDELFE SLKRSCGGSY SIVDPLNTEC LKLIKDYHKC VSGIYQELIL KPKCETTSPD CYTYRYLLSI
301: YWANNEIVRR ALKVVEGSKG KWERCDLSVR SNQDIKSSIP YHMNNSIKGY RSLVISGDHD MTIPFLGTQA WIRSLNYSIT EKWRPWMILD QVAGYTKTYA
401: NKMTLATVKG GGHTLEYKPE ENSILFKRWI SGQPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)