AT3G11920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glutaredoxin-related | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glutaredoxin-related; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: intracellular signaling pathway, cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336), DEP domain (InterPro:IPR000591), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: electron carriers;protein disulfide oxidoreductases (TAIR:AT4G08550.1); Has 2850 Blast hits to 2806 proteins in 762 species: Archae - 4; Bacteria - 1389; Metazoa - 366; Fungi - 36; Plants - 426; Viruses - 0; Other Eukaryotes - 629 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3772311..3774887 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72580.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.64 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 630 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRFEESKNNC QNPRKSEKVT NGKSYTISSD IVSPPYSNSN PISDHVHPAT PIPEAVSQSP MKEISIDDPY LPPHPQLPKL EPPRGRRVSL EELLHPKEKF 101: TGDLMKFIRQ SGNAISKRIS VLLENDDDDD SIDDVTEFKI SGVKVLVKMK NEEEIKGRIT FFSRSNCRDS TAVRLFLRER GFDFSEINID VYSSREKELV 201: ERTGSSQVPQ IFFNEKHFGG LMALNSLRNS GEFDRRVKEF LKEKCCGDAP LPVMYGFDEE SNNKDVVVVV DEMMRFVRVL RQKLPIKDRL MKMKIVKNCF 301: SGAEMVEILI DYLDCGRKKA VEIGKRLAEK HFIHHVFGEN EFEDGNHYYR FLEHEPFVSK CYNFRGSTND MEPQSAAIVG QKLFKIMTAI LESYSSNDHT 401: SVDYMRISQS EEFRRYLNLA QDFHRLNLVE LSTEEKLAFF LNLYNAMVIH ALISIGRPEG LIARRSFFTD FQYVVGGYSY SLSSIRNDIL RRGRKPSYPF 501: IRPPFNNGKT RHELGLLKLN PLVHFGLCDG TKSSPVVRFF TPQGVEAELK RAAREFFQNG GIEVVLDKRT IHLSRIIKWY KEDFSEEKKM LKWIMGYIDS 601: NDAGLLTHLL GDGGGSFNIV YQDYDWSTNN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)