AT3G11680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.381 golgi 0.216 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aluminium activated malate transporter family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G08440.1); Has 773 Blast hits to 771 proteins in 231 species: Archae - 0; Bacteria - 374; Metazoa - 0; Fungi - 30; Plants - 352; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3686995..3689329 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54403.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.06 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||
| Length | 488 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLNAQEKKA GFFQRLQDFP SKLKDDVTKR VKNVQKFAKD DPRRIIHSMK VGVALTLVSL LYYVRPLYIS FGVTGMWAIL TVVVVFEFTV GGTLSKGLNR 101: GFATLIAGAL GVGAVHLARF FGHQGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSFVAI SGYRTDEILI MAYQRLSTIL IGGTICILVS 201: IFICPVWAGE DLHKMIANNI NKLAKYLEGF EGEYFQPEKI SKETSSCVRE YKSILTSKST EDSLANLARW EPGHGRFRLR HPWKKYLKIA GLVRQCAVHL 301: EILNGYVLSN DKAPQEFESK IQEPITTMSR EVGEALKAIA KSIKTMRNDS ACVNAHIDNS KKAIKNLKIA LKSSYPETYK DLLEIIPGVT MASILIEVVN 401: CVEKIYEAVE EFSGLAHFKE TLDSKLSAEI GQHQLLHRGC VKPVLDGDNE KEDNSSCHVL ITVHDEGYLP TATAKNVLGA EKTRVDIV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)