AT3G11150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 428 Blast hits to 428 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 428; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3492986..3494599 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41710.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.55 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||
| Length | 371 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFSSAHLNH HQPLIKHGGA TAAPPPTPSC SHLNTTSKSE TAVDALSSLF HRLPPLLSLP NRRSIPSLPM VSLSAGDRLE WDDLISAVTD FGYFQLINDD 101: SDILFPPGIA EAAESDSLSL LELSEEKKES SFPKKWPLGY EADAETPSFC LDADCSTDSS ELNLSSLREF TRTLEKVGLK TVEMLANALG FGYDSTRFNT 201: LMWVNQGVPD DEPEVTNGFY PFVVCLQYQI REQKYCLLTE SGWVSVLPRV DSVLVTLGDI AQVWRNGEVK RVKYRPVLCS GQKDGPVKCV TMTLMLTLPM 301: DSMVSSLKDM ISDGDKEEEY AEEEEEDGGA RSDERRAFRP FSFKEYAWRV YQERLFFRDP LDRYRIKSLK D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)